Gene detail

Detailed information of amic_s0263.g20.t2 in Acropora microphthalma

Genomic Location: sc0000263_pilon:312598...316625
NR annotation: XP_015762996.1, PREDICTED: fructose-1-phosphate phosphatase YqaB-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0263.g20.t2

CGACGGCTGCGAGTAATAGCAGCACCATTGTTGTTGTTCTAATAGCAATTGCACCTGTTTCATCGATTTAGATTTCTTCAAGGGATTGAGGGAGATTGCTAAATATTTCACTGGCTGTAGCAGGTCCCAAACTACTCATTACAAGGGCTCTTGGAAATAGGTTTAGTACCGTAAAAGCTTCAACTACCGATATCGAGTACGCTTCGGCAGTCTCTAAGATGATTCCAGGTTCATGTATAATACCCGAAGAAGTCAAGGCTCTAGTATTTGATTGTGATGGGACACTTGTGGATACAATGCCGATACACTGGAAAGCTTGGTGTAAAATCTGCAGAGAAACTGGCCTTGTCTTTCGGAAAACTGATTTTTACACGTTGGCTGGAGTTCCAGGAAAGAAAATAATCAACGTTTTGGCAAAACAACAACAAATTAAACTTGATCCTTTCGTGATCTACGACAGAAAGAGGAAATACTTCCTAGAGGGGTTATCGTCAGCTACAGCTATTCAGTGTGTTGTACGATTTGCCCAAGAAGCTTATAAAATGGGAATTCCAACAGCAGTGGCATCGGGCAGCTCGCGCTCGCAAGTCATTCAAGGGACAATCGCCCGATTCAACAAGGGACTTCTCTTGTTCGACATTCAAATAAAAATTCGAGCCTTAAATCAAGCTGGAATTACCCACTTGTTTAATGTTGTGCTTGGAAACGAAGATTACAAAGATCACAAACCGAAACCAGACGCTTATCAAACGGCAGCTAAGCGACTTGGGGTAAGACCTGATGAATGCTGGGGCTTCGAGGACACTGACATTGGCCTTGAGGCAATAAGAAAAGCTGGGTTCCACAGATGTACAGATGTTCGGCTGCTGGAAGGATACCCCATTAGAACGGATGAAAATGGAATAGAGATACCAAACACTTCTATAGGATTTCAGAGTCACAGATATAGAGCTTTTACTTTGTAGAGATAGTCATGTGTTGTTTGTCACCCAAATTAACCTTAACTTCCCATGTCAGGCAATGAGTTATATGTGGCTACTGTCACAGAGATGACACTTAAATGGCAATTAACTCCATGAACAGTTAAACCAATGGAATGGCTTTGCTGTTTTTCAGTACTAGACACGAAAAAAGGTGTCCCGAAAATATCACAGTTTATGAATTTTATGGTAATTTTTTTAACATAATTTTTTGAAGTTGCTGGCATTGTTGCACCAGAAATTGTGACAAAGATTCAGAAATAGGTGAACCTTCCAAACAAAAGAAATAAGTTATTTTCTTCCTCCATGGATCTGTGTCAGGTTTGTACTCCTCCTTCACCATGGGAGAAAAATCTAAAGCTTGTTGATGCTGGCCTGTTCATATGAAGCTAGGCTGTAAATGGTTACATTGGTAAATTCTAGTTTGTGGAAAAAATTCTTTTTTATGCACAAGAAAGCATCAATTTTTATGTTTTTATTTACAAAGAAAATTTCAAGAATCACCGTCTGTAATGTTGCTAAACTGTGCCAGACTCACTTATGCTGTGAAATCTCACTGTAATTATTTTGGTCCTTTTTATCTTTTTTCTTGTGACCCTGAGAGGTCACACAAGTCATTTTCTTTATTAATGATTTCATTTGTACATATTGTACAGTTCTGCATAGAAAATAGTCTTGTAGAAAAAAAAACAGTCACATTCAACTCCGATACATTGTTAGATGCAAAATGGCAATTTTCACTCAATACTTATGTAGGAGATACTTGTGTAACTACTTTGACCATTCAAAATAATAATAATGAAAAAAGTTTCAGAATAATCCTTAATTTGTGAACCCAAAGGAAAGGTTTCCACATTCAGTTTGATAGCCAGTGAGGAAGGCGACTTTCTTGCTTGTCATGCAGTAGCTTCAAAAGGCTAGACCGAGGTCTACTACTTGCCGGTTCACTTTTCACCTGTATTACACATGGTGTAATCGTGATAAATCTTCCATCTAGCTGAAACTCGTCGACACTACTTTGTAGTCATTAACCCTAGCAATGCAAAATTCAAACTAGTGTAAAACTTGGGTTTATAAGAATGGCTATTACCATTCTATTACAATAATGGAGGTATTTTGACCTTATCATGAAAGAAATAATCGTTGACTGGGAAAGGGGGTATTGAAGGGTATAAGCAACAGTACAATTTTATGCAGAATGGGCTCAGTTAATTAACTTTGATGCCTTTGAATTGTAATTCATGCCTCAAATTTGAGATGCAGCAACATTCTTCATTTGACTACACAGGAAGAAACCAACAAATTTTTACACCTCAAAAAGTATTTAACAGGTTCCCTCAATCTGTAAGAGGAATACCTGGTAATAATGTTGAAGAATATTATTTTAGGCAGGAAATAAATGTAGGGGTAAAAGTACATCACAAGGCTCAACATATTTGAATATGGTCAGAATATTGTTCTGTGGTTTATTTATAACAACCCACCTTTCTCTACCAGTGAGTAGTCTTACAGACTTTACCTTGGCTCGCCCTAGACCGTTACTTATCAGTGAGGAATTTTTTGGTTGGGGGCAAATGTGCTATGAGGAGAAAATTCAAGCACTTGATGATATCACCTGACCTGGAGTCAAAATACAGTGTGTGTCCCAGCATTGTATTTAGCATTTAAAAACAGACCGTTGAGATTGCAGGGTATGGGAAAGGAAACAAAGATGGAAATTTTTGAAAGTGGTCAAAATGTGCCAACGTCACAATCAATCCATGTGAGTACCAACGGTTAGAAGGGAAAATGAAACTCATTGTTGTTC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P77475	Fructose-1-phosphate phosphatase YqaB OS=Escherichia coli (strain K12) OX=83333 GN=yqaB PE=1 SV=1
P44004	Uncharacterized protein HI_0488 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_0488 PE=3 SV=1
O33513	Protein CbbY OS=Rhodobacter capsulatus OX=1061 GN=cbbY PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005672 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00702 all species →	Hydrolase	haloacid dehalogenase-like hydrolase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036412 all species →	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR006439 all species →	Family	HAD hydrolase, subfamily IA	Interproscan
IPR023198 all species →	Homologous_superfamily	Phosphoglycolate phosphatase-like, domain 2	Interproscan
IPR023214 all species →	Homologous_superfamily	HAD superfamily	Interproscan
IPR051806 all species →	Family	HAD-like Sugar Phosphate Phosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43481 all species →	FRUCTOSE-1-PHOSPHATE PHOSPHATASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008801 all species →	Molecular Function	beta-phosphoglucomutase activity	Interproscan
GO:0050308 all species →	Molecular Function	sugar-phosphatase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0263.g20.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.