Detailed information of amic_s0276.g12.t1 in Acropora microphthalma

Genomic Location: sc0000276_pilon:111846...133501
NR annotation: XP_029183221.2, rho guanine nucleotide exchange factor 10-like protein [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8C033Rho guanine nucleotide exchange factor 10 OS=Mus musculus OX=10090 GN=Arhgef10 PE=1 SV=2
O15013Rho guanine nucleotide exchange factor 10 OS=Homo sapiens OX=9606 GN=ARHGEF10 PE=1 SV=4
Q5R5M3Rho guanine nucleotide exchange factor 10-like protein OS=Pongo abelii OX=9601 GN=ARHGEF10L PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003930 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19056
all species →
WD40_2WD40 repeated domainRepeatInterproscan
PF00621
all species →
RhoGEFRhoGEF domainDomainInterproscan
PF19057
all species →
PH_19PH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035899
all species →
Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR011993
all species →
Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR011047
all species →
Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR000219
all species →
DomainDbl homology (DH) domainInterproscan
IPR039919
all species →
FamilyRho guanine nucleotide exchange factor 10/17Interproscan
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12877
all species →
RHO GUANINE NUCLEOTIDE EXCHANGE FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005085
all species →
Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0030036
all species →
Biological Processactin cytoskeleton organizationInterproscan
GO:0051496
all species →
Biological Processpositive regulation of stress fiber assemblyInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K16727ARHGEF10; Rho guanine nucleotide exchange factor 10-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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