Detailed information of amic_s0281.g11.t1 in Acropora microphthalma

Genomic Location: sc0000281_pilon:197748...201435
NR annotation: XP_029192985.2, nucleotide-binding oligomerization domain-containing protein 1-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q86WI3Protein NLRC5 OS=Homo sapiens OX=9606 GN=NLRC5 PE=1 SV=3
P59046NACHT, LRR and PYD domains-containing protein 12 OS=Homo sapiens OX=9606 GN=NLRP12 PE=1 SV=2
Q8R4B8NACHT, LRR and PYD domains-containing protein 3 OS=Mus musculus OX=10090 GN=Nlrp3 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000079 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05729
all species →		NACHTNACHT domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007111
all species →		DomainNACHT nucleoside triphosphataseInterproscan
IPR050637
all species →		FamilyNLRP family, innate immunity and inflammation regulatorsInterproscan
IPR038359
all species →		Homologous_superfamilyConnexin, N-terminal domain superfamilyInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45690
all species →		NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0281.g11.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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