Gene detail

Detailed information of amic_s0283.g4.t1 in Acropora microphthalma

Genomic Location: sc0000283_pilon:37686...40207
NR annotation: CAF91036.1, unnamed protein product, partial [Tetraodon nigroviridis]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q94A40	Coatomer subunit alpha-1 OS=Arabidopsis thaliana OX=3702 GN=At1g62020 PE=2 SV=2
Q9SJT9	Coatomer subunit alpha-2 OS=Arabidopsis thaliana OX=3702 GN=At2g21390 PE=2 SV=1
Q27954	Coatomer subunit alpha OS=Bos taurus OX=9913 GN=COPA PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR050844	Family	Coatomer complex subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19876	COATOMER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006886	Biological Process	intracellular protein transport	Interproscan
GO:0006888	Biological Process	endoplasmic reticulum to Golgi vesicle-mediated transport	Interproscan
GO:0006890	Biological Process	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	Interproscan
GO:0006891	Biological Process	intra-Golgi vesicle-mediated transport	Interproscan
GO:0030126	Cellular Component	COPI vesicle coat	Interproscan