Detailed information of amic_s0284.g19.t2 in Acropora microphthalma

Genomic Location: sc0000284_pilon:257235...282385
NR annotation: XP_044177838.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114959623 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q149M9NACHT domain- and WD repeat-containing protein 1 OS=Homo sapiens OX=9606 GN=NWD1 PE=1 SV=3
A6H603NACHT domain- and WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Nwd1 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009465 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17908
all species →
APAF1_CAPAF-1 helical domainDomainInterproscan
PF00400
all species →
WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019775
all species →
Conserved_siteWD40 repeat, conserved siteInterproscan
IPR011047
all species →
Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR001680
all species →
RepeatWD40 repeatInterproscan
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR041452
all species →
DomainAPAF-1 helical domainInterproscan
IPR052752
all species →
FamilyNACHT and WD repeat domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19871
all species →
BETA TRANSDUCIN-RELATED PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0284.g19.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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