Detailed information of amic_s0289.g10.t2 in Acropora microphthalma

Genomic Location: sc0000289_pilon:258236...263186
NR annotation: XP_015764622.1, PREDICTED: uncharacterized protein LOC107343551 isoform X3 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001886 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13592
all species →		HTH_33Winged helix-turn helixDomainInterproscan
PF13358
all species →		DDE_3DDE superfamily endonucleaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025959
all species →		DomainWinged helix-turn helix domainInterproscan
IPR038717
all species →		DomainTc1-like transposase, DDE domainInterproscan
IPR047655
all species →		FamilyTransposase IS630-likeInterproscan
IPR036397
all species →		Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46564
all species →		TRANSPOSASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0289.g10.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP