Detailed information of amic_s0293.g19.t1 in Acropora microphthalma

Genomic Location: sc0000293_pilon:235539...242075
NR annotation: XP_015766383.1, PREDICTED: retinal dehydrogenase 1-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P27463Aldehyde dehydrogenase 1A1 OS=Gallus gallus OX=9031 GN=ALDH1A1 PE=2 SV=1
P11884Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1
P81178Aldehyde dehydrogenase, mitochondrial OS=Mesocricetus auratus OX=10036 GN=ALDH2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000413 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00171
all species →		AldedhAldehyde dehydrogenase familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016163
all species →		Homologous_superfamilyAldehyde dehydrogenase, C-terminalInterproscan
IPR016161
all species →		Homologous_superfamilyAldehyde/histidinol dehydrogenaseInterproscan
IPR016160
all species →		Conserved_siteAldehyde dehydrogenase, cysteine active siteInterproscan
IPR015590
all species →		DomainAldehyde dehydrogenase domainInterproscan
IPR016162
all species →		Homologous_superfamilyAldehyde dehydrogenase, N-terminalInterproscan
IPR029510
all species →		Conserved_siteAldehyde dehydrogenase, glutamic acid active siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11699
all species →		ALDEHYDE DEHYDROGENASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016620
all species →		Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptorInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan
GO:0004029
all species →		Molecular Functionaldehyde dehydrogenase (NAD+) activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0293.g19.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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