Gene detail

Detailed information of amic_s0295.g26.t1 in Acropora microphthalma

Genomic Location: sc0000295_pilon:262296...265976
NR annotation: XP_015780184.1, PREDICTED: potassium channel subfamily K member 3-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0295.g26.t1

GTTAACCGACCATCAGAGTTTTCTTGGCAATGCACTGGTACCTGGTAGAAAGTGGTGGTTCATTGTGCCAGTTCGACTGATGGCCACTTCGCATGCGTGAACAGCGCTATTCACATCCTTTGGAATCAGTTATGCGATAAGTAATTGCAAAGTAACTCATTTATTTTAAAAGACTGACGGATTTTGCCGTAGTATAAGCCGCCAAATTGAGGACAAATTATCGAGGCGATGGAGTCTTATGGAATTCAATTTTGCTACCGATACTAAACGGTTGATTTGTTTAGCGGTTCTTCTAGGAATTTATCTTTTGTCCGGCGCCGCTGTGTTTCAAGTCCTTGAAAATGAGAATGAGAAGCTCGAAGTACAACAGTTGAATTCTGTGAAAAGGCTTTTTCTCCAAAAACACAACATGACGTCGGAAGATTTTGATTTTTTAGTGGAGAAAGTTGAAACAGCGGTTCGACATCGCTGCGGAGGAGATCCAGACCAATGGTGTACATCAAGATGGACATACTACGCTTCATTGTATTTTACATGGAGTGTGGTAACGACTGTAGGCTATGGCCACTTAGCCCCCAGTACTTTTGGAGGTCGTGTGTTCTGTATGATTTTTGCCTTATTTGGAATTCCTCTGAACCTCATGGTTTTGCGTCATATCGGTGACAGAGTCAACCAGGCTATCAGCTATATTCACTATTTTATGGAAAGAAAAATATTACAAAGGGAATCTGACATCGTGGCGACTAAGACTCTTATGTGGACCCTGTTAGTTCTGATTTTAATGCTTTTCGTTGGAGCTTTACTTTACTTGCAAGAAGAACAATGGAACTTTCTGGAAGGAGTGTACTTTTGCTTCATCACATTTTCGACAATTGGATTTGGAGACCTGGTGCCAAATGGTGGCCAAGCTCCAACTGACCTTGAGGGAATAATCATGGAACTTTTAAGAGCGTGTGTAGTGTTACTCGGGGTGTCTATGTTCTTTTCTATAATCACTTCTGTTTTAACTGCCTCCGAGGACCTTAGAGTTAATTTTCCATCAGGAAAATACCTCGGTGCCTCGAACAATGGTTCAGCGGACACTACAGATGACATGCGCACAGAGGATCAGACCAATGTTGAGGACTTAGATGCAAAATTAACTGTCAACAATGAAGAGGCGGAATTCGATGACGAGTCAAAAAACTACCAAAAATGTCAAAATGGAAAGGAAAATGGGAATGAAGGGGAGGTTCCCTAAGCTGGGCGTTAACACACAAACCAAGAAATACAGTTTTTGCTTGATTTCCACTGCGACATAAAGATCACAGTCATAATGATAAAATCGAGAGGGAACGTGTTTCACAAATCTTGCTCGAGAAGCCTTGCAGTAGAGGAAAAAAAAATACTTCAACGCGAACATACTGGTAGATGCACTAAGAaatgaaaagttgagtttctaaagaaactctggtgtcacttcagtggggaagcgaatcacgaaaatttgcctgtcaaacTTTCGGTGTAAAAAGATGACGAAGCTGATATTTCGGGCCCTTTGTCAGAAGgaagggctaacgctcgaaacgtcagcttcgtgatctattcggaaagtgacgacgaaggcctaaccctcgaaacgtcagcttcgtgatctaatcggaaagtgacgacgaaagcctaacccttgaaacgtcagcttcgtgttctaatcggaaagtgacgacgaaggcctaaccctcgaaacgtcagcttcgtgatctaatcggaaagtgacgacgaaagcctaacccttgaaacgtcagcttcgtgatctaatcggaaagtgatgtcgaaggctaacgctcgaaacAAATACGGTTTTTTTTCCATCCTCGAAGTAGGTTTTCATTGGCCACTTTTGTTGTTATTTATATGTCAATTGTACTGCTTTTCATGGTTCCCACTTATGTAAAAGAAACCTTAACGTACTTTATAACTATGATAGTGATCGTTCCATAGTTTGCGATAACCAAGCCAGAAAATCGTTACTTGGCGGTTACACTAATTTTTTAAGAATTATCGCCTTCGGCAAACAAAAATAAATAACAAAGTGATGATGTTTTTAATCAATATTAAAAAATGATTTGATTTTGCTTGCCTATTTCACAAGGAATGGAGAAATGCCCCACGTAGGCATTGAGTTTAAtttgtatgggtactcacatgattttgagggcaattttggaataaataagcacgaatcaa

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O14649	Potassium channel subfamily K member 3 OS=Homo sapiens OX=9606 GN=KCNK3 PE=1 SV=1
O17185	Two pore potassium channel protein sup-9 OS=Caenorhabditis elegans OX=6239 GN=sup-9 PE=1 SV=2
O35111	Potassium channel subfamily K member 3 OS=Mus musculus OX=10090 GN=Kcnk3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000134 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07885 all species →	Ion_trans_2	Ion channel	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013099 all species →	Domain	Potassium channel domain	Interproscan
IPR003280 all species →	Family	Two pore domain potassium channel	Interproscan
IPR003092 all species →	Family	Two pore domain potassium channel, TASK family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11003 all species →	POTASSIUM CHANNEL, SUBFAMILY K	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005267 all species →	Molecular Function	potassium channel activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0015271 all species →	Molecular Function	outward rectifier potassium channel activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0022841 all species →	Molecular Function	potassium ion leak channel activity	Interproscan
GO:0030322 all species →	Biological Process	stabilization of membrane potential	Interproscan
GO:0071805 all species →	Biological Process	potassium ion transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04919	KCNK9, K2P9.1; potassium channel subfamily K member 9	-	Ion channels	ko04040	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.