Gene detail

Detailed information of amic_s0319.g29.t1 in Acropora microphthalma

Genomic Location: sc0000319_pilon:267406...274599
NR annotation: CAH3191004.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

amic_s0319.g29.t1

TTTAGTGTTAgttttctgtggttttttgtattgttgttgtaatttccagccagtaagcacttaagtttatgtttttttttgttacactgtttgcgcgcttattattcTACTATAACAAAcacttgcatctgaagattattgattgaaacatgtcttgcagacccaaagttgtggtccattttttgtgaatgttggtagtctgcttttatccagagcatttgCTGTATGTGTAATGATTAACCATTCCTTGTCTTGGTTTTGTGTGTTGAAAATGTTGTCTGCAATTTTTGAACAGCAAAATTATACTTTCTTTGTGGCTAGGTACTTTTATCCAAGCTACATATTTCCTTATAATAATGAAAGAAAACAGTGTTTATACTCATCACCATTGCTCGCTTTGTTTGTTGTTCATATAGGAAGGAATAAATCTTTAAAGAGACAGAAACAGCTTATTATAATCCCCAGATGCCCCATGATTTTTCCAGATTTTGGGGTCTCATAGTTAGTGCCTGCACAATAAAGGTCTAACTGAGTTTTGAAGGGGTTATAATACCATAGTCAGAAATTGTTTTTATCCTGCAACACACTTATGCTTCTGGTTTTGTCACGGTGTAACCTAAACTCTTTTTTCTTTATGTACATATGAAAAGGGTTGCTGACCTTGCTTCCCATTCCAAAGTTTGTTGCCCAAAAGACACAAGCAAACATCCAACAACGCCATCAACACCAAGCCCAGAACTTCTTCGTGTGACTGTGACATCCTCAGAAACTGATGAGAAAAATGCAACCTTTAAAGTTGTTACAAAGACAACTTTAGAACAGTACAAGTTCTCTGACTATGAAGTTCATCGCAGTGAGGGTGACTTTGAATGGCTTCAATCAGCATTAGAGGAGTCTTGTCCTGAGAGAATAATACCACCATTAGTCCTGCATTCTTCATTGCATGGGAAAATGAGAGAGGTTCAAAGATTTTTATCAAGGATTTGTGCTCATAAAGTTTTGAAAAAGCACTATCTTCTCAACTTATTTTTAACTGGCGAGGGACAGGATTTGCAAAAAGCTCGAGATGAACTTGAAATGAAAAAACAGAAAGATAAATCTGCAGTGGATGAATACATGAGTCAAGAATGTTGTGATCAGAATGCTCCAGTTATAAAGTGTCAGAGATACTTAGAACAGTTTGCCGCAAATCTTGATGGCCTAATAACTTATCTTCAAGAAAGTTTGAACAAGTGCATGATCGATGGCCCTGGTGTATGGTTTAAATCACTGTCAGACTGTGAACCATCTGATACATACTTGAAGACTGCTGCTGAAGCTCTTAGTAAAATTTGCATGGAGTTGGAGAATAACCGGGAAACAGCAGAAGAGAAGCTTATTGTGAATGATTTGAAGAGTGTGTATCACTATGTTAAAAGTGGTGAGGGGCTTCTCCAGCGAGTACAAGCTGCAGTGGCCAGGTTTGTACACTGGGAAGAGGAAGTCAGAGCCTACGAAGAAATGAAGGAGCCGTCTTTGGAGAATGAATCAGACGCAAGCAATCAAACACAAAAGTGGGCAGAGGCGAATTCCAACTGTGCTGAAGCAAAAACAAAGTTGGAACATTTGTGTAAAGAATTGTCGTCAGAGTTGGCACATTTTGATTGGAGAAAAGAAGTGGAGTTGCGGGAAATATTGATTGAATACTCAGCACTAAAATCAGAGCATTTCGAAAAGGTTCAAAGTAAATGGTTTGGAGTGAAACTGATGGTGGAGGCACCAGTAGCATCTGAGGCCCGAGCTATCAAGTGTGTGGAGGATACATAGTCACTTATGTCAACATCTTCATTATTCCTGACATCAGCTCTTTTGAGTTAAAAAGAGTCTGTTGCTATCTGAAAGTTCAAAATATTATGTATGACAAACAATATTAGTTGGCACGCAAGGAAAAGAGATTAACAGAGTCTATTGCAACCAAACGTACAAGCAAGattattattattattatcattgtaactattattgttattatGTTTAGGACAAGAAATAAGGAGCCTATGGCAAAATTAGTTTTTCAGTAGCACATAAATATTTAAAAAACCTTGATAGCTAAAATCATTGCAAAAGGCAGGTTGAATCAGATCCATTTTTTTGCCCCACCCTGAATCACCACAATAAAATGGGGTTATTTGGTGGACACCAATAAAAGAAGGACCATCTGTCATTGTTTGCATTCATGTTCATTATCTGCAGAAGTGAAAGGGGAAATATTTTCCAAGTCTTGAATGTTCACTGATAATTTTAAACTGCAAGCTGCAATGTACAAATCAAATTTAAAAGTTATAATATATTGAGAAATACTACTAGCATTTCAGTAAAATGCAAAGTTTTCAAATTTTGATGATGTTTAATGGAGTGGAAAATGTGTGATATCATTTTATACAGCTAAAACCACTTTTATGTAGGTAGAGTTATACCTTAGTTGACCCTCGTTATCTAATAAATGTCTTTTTATGTT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00787	PX	PX domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001683	Domain	Phox homology	Interproscan
IPR036871	Homologous_superfamily	PX domain superfamily	Interproscan
IPR027267	Homologous_superfamily	AH/BAR domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10555	SORTING NEXIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0035091	Molecular Function	phosphatidylinositol binding	Interproscan
GO:0005768	Cellular Component	endosome	Interproscan
GO:0010008	Cellular Component	endosome membrane	Interproscan
GO:0034498	Biological Process	early endosome to Golgi transport	Interproscan