Detailed information of amic_s0329.g6.t1 in Acropora microphthalma

Genomic Location: sc0000329_pilon:236247...240375
NR annotation: XP_015772961.1, PREDICTED: collagen alpha-1(XII) chain-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007916 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16754
all species →		PesticinBacterial toxin homologue of phage lysozyme, C-termDomainInterproscan
PF00092
all species →		VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036465
all species →		Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR031922
all species →		DomainPesticin, C-terminalInterproscan
IPR050525
all species →		FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR002035
all species →		Domainvon Willebrand factor, type AInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020
all species →		COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003796
all species →		Molecular Functionlysozyme activityInterproscan
GO:0062023
all species →		Cellular Componentcollagen-containing extracellular matrixInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0329.g6.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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