Detailed information of amic_s0346.g5.t1 in Acropora microphthalma

Genomic Location: sc0000346_pilon:81476...90199
NR annotation: XP_015757283.1, PREDICTED: uncharacterized protein LOC107336733 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9LZF7OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 10 OS=Arabidopsis thaliana OX=3702 GN=OTU10 PE=1 SV=1
Q196V4Uncharacterized protein 106R OS=Invertebrate iridescent virus 3 OX=345201 GN=IIV3-106R PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000131 (this species only)
Ubiquitin familyDUB|OTU|OTU · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14214
all species →		Helitron_like_NHelitron helicase-like domain at N-terminusFamilyInterproscan
PF02338
all species →		OTUOTU-like cysteine proteaseFamilyInterproscan
PF05970
all species →		PIF1PIF1-like helicaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012340
all species →		Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR025476
all species →		DomainHelitron helicase-like domainInterproscan
IPR003323
all species →		DomainOTU domainInterproscan
IPR010285
all species →		FamilyDNA helicase Pif1-likeInterproscan
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR051055
all species →		FamilyPIF1 DNA helicaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47642
all species →		ATP-DEPENDENT DNA HELICASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000723
all species →		Biological Processtelomere maintenanceInterproscan
GO:0003678
all species →		Molecular FunctionDNA helicase activityInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0346.g5.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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