Gene detail

Detailed information of amic_s0365.g2.t2 in Acropora microphthalma

Genomic Location: sc0000365_pilon:27056...47704
NR annotation: XP_044171643.1, D-inositol 3-phosphate glycosyltransferase 1-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

amic_s0365.g2.t2

GTCTTTCCTTTTTTGTTCTAATTTGCTGCTAAACCAAAACATGCTTAAGTGTTCTACTTGATTTTTAAATTAGGTGCCACTTTTAGTGAAATTAAAAGTGCTAAGATAACTGTGGAAATGGTTTCCTTTAGCTTCCTGTGATGGCGACACATggttcatcctttccaggcacatcaggttctttgtcacaggaagccacagaaggcggcgcaagtttgatttccagcaggaaactaaatgttactttgctaggtagtgagtgggggtctacaaaaggaggcttgtccacatttaacagagaacttgctattcatttggcaaagcatgacaatgtggaagttagcatgtaccttcctcagtgcagtgaggaagataaaggagcagctgctaaattcagagtcaatcttcttaaagcagagaagaagcctgcaagtgatccaattgaatggttagcatcggttccaagagagcattgtatggacgttgtgataggtcatggtattcatcttggtcgacaggttccaaggataaaagagctacgtcccaattgcaaatggattcaatttgttcacacagacgctgaagaacttggaatgtctaaggactatccttgtcccactgtcaaaggtgaaaaaaagcacgaggctgaggttgaactctgcgaatgggcagatcaagttgcagctgttggacccaaattgtccgaaacctttgctcgctatttgcgtcccactggaaaggatcaagatgtcataaatttcaccccaggcctcttttcagagttttctaatataaaacaagctgctgaagaaggagaaatattttgtgttttagtctttgggcgtggtgataaagaagattttcatgtaaagggatacgacattgctgcacgtgcagttgctaagctgaaagacgaagaacgctctttcaaacttatgtttgttggtgcaccaaatggagaagaggagaaagtaaaggaaagattccttgatgaaggcatttcacccaatcaactcattgtgcgcagtgcaaaggacagagaacagcttgccaagcagttttgtcaagctgaccttgttataatgccctcaagaactgaaggttttggtctggctgcactggaagctttgtctgctggtcttcctgtgcttgtcagtggtaattccggtattggcaaggctttgaaaaaggttcccagtggtccaaactgtgtggtcaggagtgacgatccagtgaagtgggcagaggcaatcaaggcagtttgcagaaaggaaagaaaagtacgactgaaggaggctattttgcttcgtcaaaactatgcagagacgtaccagtgggaagggcaatgcagcacacttgtagagaagatgcttgaaatgatcaaaggggttgactatgcaacttttgatcgaggttattcatcatcaagaagtaatcagttggaatcttcaatgggtgcccaagctatgattcagcatggaggctcagatgaaagtgtatcattcaagcctgggactgtttcagaagatgatgttattctcattgcggatgagcttggtcctttatggataaaaattggccgggtgctgaaagtctcgaaagctgtgattaatcagattgaagcagacaagtctggagtctctgataaatgctatactgtcctaactaagtggcaagagttgttcccaTatgatgcaacatatcatcgcttggcactggcattgaagcatcccGctgttggacgagtagatttggctgccaagtattgcgagctataatttaacAATTaaggatgtatcagtggctaaggatttttagtgtAtactcgttcagtgatcttgctttttcaaacaaactgattggttcactAtccctgtgtaattgagcgctggtacaagcagtgcttcgcGcctcaaccctttgtagtgacgtgaccacgttaaagtttgaaggtgatcatggtctttcttcttaggctcttagcatataaggggttacccaaaccacgtctctagaagttttagtgtttaacgaaactatgatgccgtgtcggtggagaactgaaacgcgaaaattggtgattaaagcaGttgatgaGGGCCGAATAGTTATATACTCTTAAAATAATAAGCAGACGTCTTGAGCTTTAGCCCTTCATCAAAGCAATTCACGAAGGGCTAACGCTTGAAATATGACTTTTGTAATGTTCTTACTTTAATGTCGCTTTCACGTCTTCTTTACTTCACAATTCGTCGAGCTTCCACTACCGTCCGTTGCTTTATTCACACTAGTTTTTTGAATAATCTCGGGTGCTATATAAACACCTAACATGCAT

Protein

Uniprot

Uniprot term	Description
D5UJ42	D-inositol 3-phosphate glycosyltransferase OS=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / BCRC 11376 / JCM 18109 / NBRC 3775 / NCIMB 8073 / NRS 134) OX=446466 GN=mshA PE=3 SV=1
A1R8N8	D-inositol 3-phosphate glycosyltransferase OS=Paenarthrobacter aurescens (strain TC1) OX=290340 GN=mshA PE=3 SV=1
D1BD84	D-inositol 3-phosphate glycosyltransferase OS=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) OX=446469 GN=mshA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20706	GT4-conflict	Family 4 Glycosyltransferase in conflict systems	Family	Interproscan
PF00531	Death	Death domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050194	Family	Glycosyltransferase group 1	Interproscan
IPR000488	Domain	Death domain	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45947	SULFOQUINOVOSYL TRANSFERASE SQD2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016757	Molecular Function	glycosyltransferase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan