Detailed information of amic_s0366.g3.t1 in Acropora microphthalma

Genomic Location: sc0000366_pilon:57186...68396
NR annotation: XP_029213649.2, neuronal pentraxin-2-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P06205C-reactive protein 1.1 OS=Limulus polyphemus OX=6850 PE=1 SV=1
P06207C-reactive protein 3.3 OS=Limulus polyphemus OX=6850 PE=1 SV=1
P06206C-reactive protein 1.4 OS=Limulus polyphemus OX=6850 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000095 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00354
all species →		PentaxinPentaxin familyDomainInterproscan
PF01391
all species →		CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051360
all species →		FamilyNeuronal Pentraxin and RelatedInterproscan
IPR001759
all species →		FamilyPentraxin-relatedInterproscan
IPR008160
all species →		RepeatCollagen triple helix repeatInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19277
all species →		PENTRAXINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for amic_s0366.g3.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0366.g3.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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