Detailed information of amic_s0377.g9.t1 in Acropora microphthalma

Genomic Location: sc0000377_pilon:116990...123335
NR annotation: XP_044171549.1, LOW QUALITY PROTEIN: gamma-butyrobetaine dioxygenase-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9QZU7Gamma-butyrobetaine dioxygenase OS=Rattus norvegicus OX=10116 GN=Bbox1 PE=1 SV=1
Q0VC74Trimethyllysine dioxygenase, mitochondrial OS=Bos taurus OX=9913 GN=TMLHE PE=2 SV=1
Q91ZW6Trimethyllysine dioxygenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tmlhe PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000823 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02668
all species →		TauDTaurine catabolism dioxygenase TauD, TfdA familyDomainInterproscan
PF06155
all species →		GBBH-like_NGamma-butyrobetaine hydroxylase-like, N-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050411
all species →		FamilyAlpha-ketoglutarate-dependent hydroxylasesInterproscan
IPR003819
all species →		DomainTauD/TfdA-like domainInterproscan
IPR010376
all species →		DomainGamma-butyrobetaine hydroxylase-like, N-terminalInterproscan
IPR038492
all species →		Homologous_superfamilyGBBH-like, N-terminal domain superfamilyInterproscan
IPR042098
all species →		Homologous_superfamilyTaurine dioxygenase TauD-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10696
all species →		GAMMA-BUTYROBETAINE HYDROXYLASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0045329
all species →		Biological Processcarnitine biosynthetic processInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0377.g9.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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