Detailed information of amic_s0393.g2.t1 in Acropora microphthalma

Genomic Location: sc0000393_pilon:44006...45543
NR annotation: XP_015773580.1, PREDICTED: uncharacterized protein LOC107351788 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q05120Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus OX=262177 GN=V-UBI PE=3 SV=1
P16709viral Ubiquitin OS=Autographa californica nuclear polyhedrosis virus OX=46015 GN=vUbi PE=1 SV=2
Q39256Polyubiquitin 8 OS=Arabidopsis thaliana OX=3702 GN=UBQ8 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002020 (this species only)
Ubiquitin familyULD|UBL|NEDD8 · all ubiquitin genes in this species
Ubiquitin familyULD|UFD/UBQ|UBQ_Other · all ubiquitin genes in this species
Ubiquitin familyULD|UFD/UBQ|UBQ_PIM · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240
all species →		ubiquitinUbiquitin familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000626
all species →		DomainUbiquitin-like domainInterproscan
IPR029071
all species →		Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR019956
all species →		DomainUbiquitin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR36649
all species →		UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0393.g2.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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