Detailed information of amic_s0396.g12.t1 in Acropora microphthalma

Genomic Location: sc0000396_pilon:107168...117295
NR annotation: XP_015750927.1, PREDICTED: RING finger protein 150-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5DTZ6RING finger protein 150 OS=Mus musculus OX=10090 GN=Rnf150 PE=2 SV=2
Q9ULK6RING finger protein 150 OS=Homo sapiens OX=9606 GN=RNF150 PE=1 SV=2
Q9H0F5E3 ubiquitin-protein ligase RNF38 OS=Homo sapiens OX=9606 GN=RNF38 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010200 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639
all species →		zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR051073
all species →		FamilyZNRF3/Arkadia E3 ubiquitin-protein ligasesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16200
all species →		RING ZINC FINGERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006511
all species →		Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0396.g12.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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