Detailed information of amic_s0396.g2.t1 in Acropora microphthalma

Genomic Location: sc0000396_pilon:8452...17855
NR annotation: XP_029198256.2, coiled-coil alpha-helical rod protein 1-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8HZ58Coiled-coil alpha-helical rod protein 1 OS=Pongo pygmaeus OX=9600 GN=CCHCR1 PE=3 SV=1
Q8HZ60Coiled-coil alpha-helical rod protein 1 OS=Pan troglodytes OX=9598 GN=CCHCR1 PE=3 SV=1
Q8HZ57Coiled-coil alpha-helical rod protein 1 OS=Pan paniscus OX=9597 GN=CCHCR1 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007464 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07111
all species →		HCRAlpha helical coiled-coil rod protein (HCR)Coiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009800
all species →		FamilyCoiled-coil alpha-helical rod protein 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46822
all species →		COILED-COIL ALPHA-HELICAL ROD PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0030154
all species →		Biological Processcell differentiationInterproscan
GO:0005814
all species →		Cellular ComponentcentrioleInterproscan
GO:0006611
all species →		Biological Processprotein export from nucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0396.g2.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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