Detailed information of amic_s0399.g5.t1 in Acropora microphthalma

Genomic Location: sc0000399_pilon:120066...145418
NR annotation: XP_020898597.2, uncharacterized protein LOC110237350 [Exaiptasia diaphana]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q99315Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3
P04323Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P20825Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002384 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00353
all species →		HemolysinCabindRTX calcium-binding nonapeptide repeat (4 copies)RepeatInterproscan
PF00084
all species →		SushiSushi repeat (SCR repeat)DomainInterproscan
PF17919
all species →		RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000436
all species →		DomainSushi/SCR/CCP domainInterproscan
IPR001190
all species →		DomainSRCR domainInterproscan
IPR011049
all species →		Homologous_superfamilySerralysin-like metalloprotease, C-terminalInterproscan
IPR018511
all species →		Conserved_siteHemolysin-type calcium-binding conserved siteInterproscan
IPR001343
all species →		RepeatRTX calcium-binding nonapeptide repeatInterproscan
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR051320
all species →		FamilyViral Replication and Maturation PolyproteinInterproscan
IPR035976
all species →		Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR043128
all species →		Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041577
all species →		DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33064
all species →		POL PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0399.g5.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP