Gene detail

Detailed information of amic_s0498.g5.t1 in Acropora microphthalma

Genomic Location: sc0000498_pilon:64326...72806
NR annotation: XP_044166468.1, uncharacterized protein LOC114951991 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008252 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05461 all species →	ApoL	Apolipoprotein L	Family	Interproscan
PF00652 all species →	Ricin_B_lectin	Ricin-type beta-trefoil lectin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000772 all species →	Domain	Ricin B, lectin domain	Interproscan
IPR035992 all species →	Homologous_superfamily	Ricin B-like lectins	Interproscan
IPR008405 all species →	Family	Apolipoprotein L	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14096 all species →	APOLIPOPROTEIN L	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005576 all species →	Cellular Component	extracellular region	Interproscan
GO:0006869 all species →	Biological Process	lipid transport	Interproscan
GO:0008289 all species →	Molecular Function	lipid binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0042157 all species →	Biological Process	lipoprotein metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0498.g5.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.