Detailed information of amic_s0508.g4.t1 in Acropora microphthalma

Genomic Location: sc0000508_pilon:27235...41505
NR annotation: XP_015777759.1, PREDICTED: leucine-rich repeat-containing G-protein coupled receptor 6-like isoform X2 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0013265 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13855
all species →		LRR_8Leucine rich repeatRepeatInterproscan
PF13895
all species →		Ig_2Immunoglobulin domainDomainInterproscan
PF00431
all species →		CUBCUB domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan
IPR000859
all species →		DomainCUB domainInterproscan
IPR050467
all species →		FamilyLeucine-rich repeat and fibronectin type-III domain-containingInterproscan
IPR035914
all species →		Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR003591
all species →		RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45842
all species →		SYNAPTIC ADHESION-LIKE MOLECULE SALMInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0508.g4.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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