Detailed information of amic_s0612.g5.t1 in Acropora microphthalma

Genomic Location: sc0000612_pilon:106296...119267
NR annotation: XP_015777517.1, PREDICTED: protein NLRC3-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P33076MHC class II transactivator OS=Homo sapiens OX=9606 GN=CIITA PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000067 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05729
all species →		NACHTNACHT domainDomainInterproscan
PF13516
all species →		LRR_6Leucine Rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR007111
all species →		DomainNACHT nucleoside triphosphataseInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46312
all species →		NACHT DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0612.g5.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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