Detailed information of amic_s0687.g2.t1 in Acropora microphthalma

Genomic Location: sc0000687_pilon:36310...40588
NR annotation: XP_015760845.1, PREDICTED: transcription initiation factor IIA subunit 1-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P52655Transcription initiation factor IIA subunit 1 OS=Homo sapiens OX=9606 GN=GTF2A1 PE=1 SV=1
Q5RCU0Transcription initiation factor IIA subunit 1 OS=Pongo abelii OX=9601 GN=GTF2A1 PE=2 SV=1
O08949Transcription initiation factor IIA subunit 1 OS=Rattus norvegicus OX=10116 GN=Gtf2a1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006416 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03153
all species →		TFIIATranscription factor IIA, alpha/beta subunitFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004855
all species →		FamilyTranscription factor IIA, alpha/beta subunitInterproscan
IPR009088
all species →		Homologous_superfamilyTranscription factor IIA, beta-barrelInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12694
all species →		TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005672
all species →		Cellular Componenttranscription factor TFIIA complexInterproscan
GO:0006366
all species →		Biological Processtranscription by RNA polymerase IIInterproscan
GO:0006367
all species →		Biological Processtranscription initiation at RNA polymerase II promoterInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0687.g2.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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