Genomic Location: sc0000714_pilon:11766...37047
NR annotation: XP_015755810.1, PREDICTED: uncharacterized protein LOC107335320 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families
| CDS |
| amic_s0714.g2.t1 |
| Transcript |
| amic_s0714.g2.t1 |
| Protein |
| amic_s0714.g2.t1 |
| UniProt accession | Description |
|---|---|
| Q6PFY8 | E3 ubiquitin-protein ligase TRIM45 OS=Mus musculus OX=10090 GN=Trim45 PE=1 SV=2 |
| Q5BIM1 | E3 ubiquitin-protein ligase TRIM45 OS=Bos taurus OX=9913 GN=TRIM45 PE=2 SV=1 |
| Q56R14 | E3 ubiquitin-protein ligase TRIM33 OS=Xenopus laevis OX=8355 GN=trim33 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000199 (this species only) |
| Ubiquitin family | UBD|Other|Beta-prp · all ubiquitin genes in this species |
| Ubiquitin family | E3|E3 activity RING|RING · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF20706 all species → | GT4-conflict | Family 4 Glycosyltransferase in conflict systems | Family | Interproscan |
| PF00630 all species → | Filamin | Filamin/ABP280 repeat | Domain | Interproscan |
| PF00643 all species → | zf-B_box | B-box zinc finger | Domain | Interproscan |
| PF17170 all species → | DUF5128 | 6-bladed beta-propeller | Repeat | Interproscan |
| PF01436 all species → | NHL | NHL repeat | Repeat | Interproscan |
| PF13445 all species → | zf-RING_UBOX | RING-type zinc-finger | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR014756 all species → | Homologous_superfamily | Immunoglobulin E-set | Interproscan |
| IPR001258 all species → | Repeat | NHL repeat | Interproscan |
| IPR000315 all species → | Domain | B-box-type zinc finger | Interproscan |
| IPR017868 all species → | Repeat | Filamin/ABP280 repeat-like | Interproscan |
| IPR001298 all species → | Repeat | Filamin/ABP280 repeat | Interproscan |
| IPR011042 all species → | Homologous_superfamily | Six-bladed beta-propeller, TolB-like | Interproscan |
| IPR017907 all species → | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR001841 all species → | Domain | Zinc finger, RING-type | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR013783 all species → | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR050952 all species → | Family | Tripartite Motif and NHL Repeat Containing E3 Ligases | Interproscan |
| IPR027370 all species → | Domain | Zinc finger, RING-type, eukaryotic | Interproscan |
| IPR003649 all species → | Domain | B-box, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24104 all species → | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| GO:0000209 all species → | Biological Process | protein polyubiquitination | Interproscan |
| GO:0043161 all species → | Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0061630 all species → | Molecular Function | ubiquitin protein ligase activity | Interproscan |
amic_s0714.g2.t1.
