Gene detail

Detailed information of amic_s0910.g3.t1 in Acropora microphthalma

Genomic Location: sc0000910_pilon:12018...16055
NR annotation: XP_029185565.2, heat shock 70 kDa protein 12A-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0910.g3.t1

GTTAATTTTTACTCGCAAATATTTGAAGAAATCGACGGTTTCGATGGCCTCCTTGGATCCCGACCATTTTGGGAGAAGCTTAAACCTTTTCGACCATTTACGCTTTCCAAGAGGTCTTAGGATAAAACATGAATGTGACGTGGTTGTGGCAATCGATTTTGGAACTTCGTGCAGTGGTTTTGCTTTCTCCTTTAACCACAAAGACGGAAGTGAAGAAATCTACATGAACAGAGCGTGGGGCAGAGAACAAGGGTATTCCACTTTTAAAACACCGACGTGCTTATTGTTGAACCAGCATCGAGAATTTAAGAAATTTGGATATGAAGCTGCCGAGAAATATGCAGAGTTGGAGGATGCCGAAGACAGGTCATTTTACTACTTTGATCACTTTAAAATGATGCTTTATGGATCGGAGAAAACTTTAAATAGGGACACCACTCTAGAAGCTCGGAACGGGAAACGCTTACGAGCCCTGGACATATTCTCCTATTCGCTGAAATATTTGAAAGACAAGGCCTTGGAGCGGATAAGCGAACAAAGTGGAGTTGAATACCAAACCGAGGAAGTACTCTGGGTCATTACAGTCCCAGCAATATGGAAGCAGTCTGCGAAACAGTTTATGAGAGAGGCGGCTTATCAGGCTGGTCTTATCACTCCAAATAACTCCGACCAGCTAATCATTGCCTTAGAACCCGAAGCTGCGGCAGTATTCTGTCGACAAAGCAAATTAAGGGAGTTTGTGGAGGGAAGAAATCGCGATGAAACTGTAAGTTCGGCCTTTGTTCCTGCACAAACCCAATACTTGGTTGTGGACAATGGAGGAGGAACCATGGATGTTACAGTTCATGAGGTCGACGATAATGATGACGTAAAGGAAATCTACCATGCGACGGGCGGTGCTTTCGGAGGGACCAAGGTGGACAAAGAATTCCAGAAGCTGTTGGAAAAGGTGTTTGGAGTGGACTTAATGGACGAGTTCCGCCGTTCTCACCCTTCGGACTGGTTGGAATTGATGAATGATTTTGAAATGAAGAAACGCGGTGACCGTGTAATGAAAGGAGAGGAGACGCGAGTCAGACTTCCAGCAAATTTTGTCAACCTCATGAGACACGAAAATTTTGGCCGCAGTGACAACGAAATCATCAAGCGACATTACAATGCAAAGCAACTTAGGATCTCGAAAGAGTACTTGTGCTTGGGATCAGAAATAGTCAAAAGCCTGTTTGAGCCAACCATTAACTCCATTATCAAACATATGGAAACTCTTAGCAAGAAAAAGGAATTGAAAAGTGTAAAGCTAATGTTTCTTGTTGGTGGTTTCTCTGAGTCGCCTCTTCTTCAGGCTGGCATAAAAGAAAAGTTCAAAGACAAGTACAAAATTCTGATTCCAAATGATGCTGAAACCGCAGTGGTAAAGGGTGCCGTGATGTTCGGGAGGCGACCACACGTTGTGGTGGAGCGATGCCTTTCGGAGACATACGGCACTGATTGCTGTGTAGACTTCATAAATGGTCTCCACAAGAATGAAAAGTTAACAATTATCGATGGCAAAAGGTTGTGCAAAGACATATTTTGTGCTCTGGCAAAAGAAAACGACAAAGTCAAGATGGGCCAGTGCAAGACTTCTAAATTTAGTCCCAGTTCAGCAAATCAAACTGCAGTTGGCTTCGACTTTTACACTTCATCTAATCCAGATGTGTTCTACACAACAGATGCAGGCGTCAGGAAGCTACCTGGTTATATGTCTGTCGAAAGCCCCAACACATCAAAAGGAACGAAGCGCGAGATCAAGCTTGAGGTGTACTTCAATACCGAAATCAAAGTGATCGGAATAGATGTTGAAACAGGAAACGAAGCAACCACTTCCATTGATTTCTTATGGCACTAATTCATCCGTATTGAATTTGAAATACTTGGACATGACATTGAACTCTTAGCGAACCGGGTCTATAAAGCAAGGATTCATTTTATGAACACTTCGTTAACAAAACATTAAACAACACGGAACCTCAAGCGAGGTCAAATATAGTTTTGTGTTCTTAAAGCATCTATAAATCAGTTGATCAACTGAATCATGAGTAATGCCTACACAGAAAGCACAGCCACATGTAATTGTTTCATGTTTTTAGGAGCATTCCTTCCAGTCGTGGTGCAAGCTTTCGAATATATCTATATATATCTTGTCTAAATTCAAAGGGTAAAACGAAGCTAATTTAGCCTTTAAAGGCGATTAATCATTTCCTTTTGATTTTGATATATTTTCCCACGTTTTTGCTGCTAATGTATGAGAAGTTTACAGATTGATGGATGAAAAATTACAATGCAGTTACACACTTTGTAGCATCCATGAGTGAATTTATTGATCATTGTTTTAAAATGGTCGAATAGAGCCTTGACGCAGTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8K0U4	Heat shock 70 kDa protein 12A OS=Mus musculus OX=10090 GN=Hspa12a PE=1 SV=1
O43301	Heat shock 70 kDa protein 12A OS=Homo sapiens OX=9606 GN=HSPA12A PE=1 SV=2
Q9CZJ2	Heat shock 70 kDa protein 12B OS=Mus musculus OX=10090 GN=Hspa12b PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000530 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00012 all species →	HSP70	Hsp70 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013126 all species →	Family	Heat shock protein 70 family	Interproscan
IPR043129 all species →	Homologous_superfamily	ATPase, nucleotide binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14187 all species →	ALPHA KINASE/ELONGATION FACTOR 2 KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0140662 all species →	Molecular Function	ATP-dependent protein folding chaperone	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03283	HSPA1_6_8; heat shock 70kDa protein 1/6/8	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.