Detailed information of amic_s0947.g2.t1 in Acropora microphthalma

Genomic Location: sc0000947_pilon:3380...5205
NR annotation: XP_015756409.1, PREDICTED: lysine--tRNA ligase-like isoform X1 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q99MN1Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars1 PE=1 SV=1
P37879Lysine--tRNA ligase OS=Cricetulus griseus OX=10029 GN=KARS1 PE=1 SV=1
Q5XIM7Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003612 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00152
all species →		tRNA-synt_2tRNA synthetases class II (D, K and N) DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004364
all species →		DomainAminoacyl-tRNA synthetase, class II (D/K/N)Interproscan
IPR006195
all species →		DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR045864
all species →		Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42918
all species →		LYSYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0004812
all species →		Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006418
all species →		Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0000049
all species →		Molecular FunctiontRNA bindingInterproscan
GO:0004824
all species →		Molecular Functionlysine-tRNA ligase activityInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006430
all species →		Biological Processlysyl-tRNA aminoacylationInterproscan
GO:0017101
all species →		Cellular Componentaminoacyl-tRNA synthetase multienzyme complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0947.g2.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP