Detailed information of amic_s0953.g1.t1 in Acropora microphthalma

Genomic Location: sc0000953_pilon:1...14515
NR annotation: CAH3016948.1, unnamed protein product, partial [Porites evermanni]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002384 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00084
all species →		SushiSushi repeat (SCR repeat)DomainInterproscan
PF00353
all species →		HemolysinCabindRTX calcium-binding nonapeptide repeat (4 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018511
all species →		Conserved_siteHemolysin-type calcium-binding conserved siteInterproscan
IPR011049
all species →		Homologous_superfamilySerralysin-like metalloprotease, C-terminalInterproscan
IPR000436
all species →		DomainSushi/SCR/CCP domainInterproscan
IPR050557
all species →		FamilyRTX toxin and mannuronan C5-epimeraseInterproscan
IPR001343
all species →		RepeatRTX calcium-binding nonapeptide repeatInterproscan
IPR001190
all species →		DomainSRCR domainInterproscan
IPR035976
all species →		Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR38340
all species →		S-LAYER PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0953.g1.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP