Detailed information of amic_s1032.g2.t1 in Acropora microphthalma

Genomic Location: sc0001032_pilon:9517...16839
NR annotation: XP_029198419.2, F-box/LRR-repeat protein 4-like isoform X1 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9UKA2F-box/LRR-repeat protein 4 OS=Homo sapiens OX=9606 GN=FBXL4 PE=1 SV=2
Q8BH70F-box/LRR-repeat protein 4 OS=Mus musculus OX=10090 GN=Fbxl4 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005482 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13516
all species →		LRR_6Leucine Rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR006553
all species →		RepeatLeucine-rich repeat, cysteine-containing subtypeInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13318
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0019005
all species →		Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0031146
all species →		Biological ProcessSCF-dependent proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10268FBXL2_20; F-box and leucine-rich repeat protein 2/20-Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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