Gene detail

Detailed information of amic_s1371.g2.t1 in Acropora microphthalma

Genomic Location: sc0001371_pilon:4716...9837
NR annotation: AII17358.1, calmodulin, partial [Penaeus monodon]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P05419	Neo-calmodulin (Fragment) OS=Gallus gallus OX=9031 PE=2 SV=1
Q40302	Calmodulin OS=Macrocystis pyrifera OX=35122 PE=2 SV=3
Q9U6D3	Calmodulin OS=Myxine glutinosa OX=7769 PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000122 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00036 all species →	EF-hand_1	EF hand	Domain	Interproscan
PF13202 all species →	EF-hand_5	EF hand	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR050145 all species →	Family	Calmodulin and Centrin Calcium-Binding Families	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23050 all species →	CALCIUM BINDING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0030234 all species →	Molecular Function	enzyme regulator activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02183	CALM; calmodulin	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.