Detailed information of amic_s1429.g1.t2 in Acropora microphthalma

Genomic Location: sc0001429_pilon:1...9202
NR annotation: XP_044174431.1, E3 ubiquitin-protein ligase HECTD1-like isoform X2 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9ULT8E3 ubiquitin-protein ligase HECTD1 OS=Homo sapiens OX=9606 GN=HECTD1 PE=1 SV=4
Q69ZR2E3 ubiquitin-protein ligase HECTD1 OS=Mus musculus OX=10090 GN=Hectd1 PE=1 SV=2
Q9VL06E3 ubiquitin-protein ligase Ufd4 OS=Drosophila melanogaster OX=7227 GN=Ufd4 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003326 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06701
all species →
MIB_HERC2Mib_herc2DomainInterproscan
PF07738
all species →
Sad1_UNCSad1 / UNC-like C-terminal FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010606
all species →
DomainMib-herc2Interproscan
IPR037252
all species →
Homologous_superfamilyMib/herc2 domain superfamilyInterproscan
IPR012919
all species →
DomainSUN domainInterproscan
IPR008979
all species →
Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47457
all species →
OS05G0345500 PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →
Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567
all species →
Biological Processprotein ubiquitinationInterproscan
GO:0046872
all species →
Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s1429.g1.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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