Detailed information of amic_s1503.g1.t1 in Acropora microphthalma

Genomic Location: sc0001503_pilon:1...8389
NR annotation: XP_015776676.1, PREDICTED: integrator complex subunit 11-like [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZIH0Integrator complex subunit 11 OS=Gallus gallus OX=9031 GN=INTS11 PE=2 SV=1
Q503E1Integrator complex subunit 11 OS=Danio rerio OX=7955 GN=cpsf3l PE=2 SV=1
Q5TA45Integrator complex subunit 11 OS=Homo sapiens OX=9606 GN=INTS11 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001366 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16661
all species →		Lactamase_B_6Metallo-beta-lactamase superfamily domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050698
all species →		FamilyRNA Processing Metallo-Beta-Lactamase Domain-Containing ProteinInterproscan
IPR036866
all species →		Homologous_superfamilyRibonuclease Z/Hydroxyacylglutathione hydrolase-likeInterproscan
IPR001279
all species →		DomainMetallo-beta-lactamaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11203
all species →		CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004521
all species →		Molecular FunctionRNA endonuclease activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0016180
all species →		Biological ProcesssnRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s1503.g1.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP