Detailed information of amic_s1597.g2.t1 in Acropora microphthalma

Genomic Location: sc0001597_pilon:4706...7463
NR annotation: XP_015747189.1, PREDICTED: proteasome subunit beta type-5-like isoform X2 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O55234Proteasome subunit beta type-5 OS=Mus musculus OX=10090 GN=Psmb5 PE=1 SV=3
P28074Proteasome subunit beta type-5 OS=Homo sapiens OX=9606 GN=PSMB5 PE=1 SV=3
Q5R8S2Proteasome subunit beta type-5 OS=Pongo abelii OX=9601 GN=PSMB5 PE=2 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008939 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00227
all species →		ProteasomeProteasome subunitDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001353
all species →		FamilyProteasome, subunit alpha/betaInterproscan
IPR029055
all species →		Homologous_superfamilyNucleophile aminohydrolases, N-terminalInterproscan
IPR023333
all species →		FamilyProteasome B-type subunitInterproscan
IPR000243
all species →		FamilyPeptidase T1A, proteasome beta-subunitInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR32194
all species →		METALLOPROTEASE TLDDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005839
all species →		Cellular Componentproteasome core complexInterproscan
GO:0051603
all species →		Biological Processproteolysis involved in protein catabolic processInterproscan
GO:0004298
all species →		Molecular Functionthreonine-type endopeptidase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02737PSMB5; 20S proteasome subunit beta 5EC:3.4.25.1
Proteasomeko03051deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP