Detailed information of amic_s2276.g1.t2 in Acropora microphthalma

Genomic Location: sc0002276_pilon:510...3607
NR annotation: XP_015775449.1, PREDICTED: putative hydroxypyruvate isomerase [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6CZ232-oxo-tetronate isomerase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=otnI PE=1 SV=1
Q468912-oxo-tetronate isomerase OS=Escherichia coli (strain K12) OX=83333 GN=otnI PE=1 SV=1
P30147Hydroxypyruvate isomerase OS=Escherichia coli (strain K12) OX=83333 GN=hyi PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003862 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01261
all species →		AP_endonuc_2Xylose isomerase-like TIM barrelDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036237
all species →		Homologous_superfamilyXylose isomerase-like superfamilyInterproscan
IPR050417
all species →		FamilySugar Epimerase/IsomeraseInterproscan
IPR013022
all species →		DomainXylose isomerase-like, TIM barrel domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43489
all species →		ISOMERASEInterproscan

 Gene Ontology
No Gene Ontology signature was detected for amic_s2276.g1.t2. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s2276.g1.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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