Detailed information of amic_s2641.g1.t1 in Acropora microphthalma

Genomic Location: sc0002641_pilon:1...2104
NR annotation: XP_015757207.1, PREDICTED: coatomer subunit beta-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0JN39Coatomer subunit beta OS=Bos taurus OX=9913 GN=COPB1 PE=1 SV=1
Q5ZIA5Coatomer subunit beta OS=Gallus gallus OX=9031 GN=COPB1 PE=2 SV=1
Q66HV4Coatomer subunit beta OS=Danio rerio OX=7955 GN=copb1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0022970 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07718
all species →		Coatamer_beta_CCoatomer beta C-terminal regionDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016460
all species →		FamilyCoatomer beta subunit (COPB1)Interproscan
IPR011710
all species →		DomainCoatomer beta subunit, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10635
all species →		COATOMER SUBUNIT BETAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0006888
all species →		Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0006891
all species →		Biological Processintra-Golgi vesicle-mediated transportInterproscan
GO:0030126
all species →		Cellular ComponentCOPI vesicle coatInterproscan
GO:0005198
all species →		Molecular Functionstructural molecule activityInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s2641.g1.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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