Detailed information of amic_s2846.g1.t1 in Acropora microphthalma

Genomic Location: sc0002846_pilon:1...2645
NR annotation: XP_015768237.1, PREDICTED: ubiquitin domain-containing protein UBFD1-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007435 (this species only) · gene tree & orthology
Ubiquitin familyULD|UFD/UBQ|UBQ_Other · all ubiquitin genes in this species
Ubiquitin familyULD|UFD/UBQ|UBQ_PIM · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240
all species →		ubiquitinUbiquitin familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000626
all species →		DomainUbiquitin-like domainInterproscan
IPR039120
all species →		FamilyUbiquitin domain-containing protein UBFD1Interproscan
IPR029071
all species →		Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16470
all species →		UBIQUITIN DOMAIN-CONTAINING PROTEIN UBFD1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0045296
all species →		Molecular Functioncadherin bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s2846.g1.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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