Detailed information of amic_s2944.g1.t1 in Acropora microphthalma

Genomic Location: sc0002944_pilon:1...1794
NR annotation: XP_044173377.1, short transient receptor potential channel 4-like isoform X2 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P34586Transient-receptor-potential-like protein OS=Caenorhabditis elegans OX=6239 GN=trp-1 PE=2 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001804 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00023
all species →		AnkAnkyrin repeatRepeatInterproscan
PF08344
all species →		TRP_2Transient receptor ion channel IIFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002110
all species →		RepeatAnkyrin repeatInterproscan
IPR036770
all species →		Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR002153
all species →		FamilyTransient receptor potential channel, canonicalInterproscan
IPR013555
all species →		DomainTransient receptor ion channel domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10117
all species →		TRANSIENT RECEPTOR POTENTIAL CHANNELInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005262
all species →		Molecular Functioncalcium channel activityInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0015279
all species →		Molecular Functionstore-operated calcium channel activityInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0034703
all species →		Cellular Componentcation channel complexInterproscan
GO:0051480
all species →		Biological Processregulation of cytosolic calcium ion concentrationInterproscan
GO:0070588
all species →		Biological Processcalcium ion transmembrane transportInterproscan
GO:0070679
all species →		Molecular Functioninositol 1,4,5 trisphosphate bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s2944.g1.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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