Detailed information of amic_s2980.g1.t1 in Acropora microphthalma

Genomic Location: sc0002980_pilon:2...1375
NR annotation: XP_015763737.1, PREDICTED: histone-lysine N-methyltransferase SETD1B-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q1LY77Histone-lysine N-methyltransferase SETD1B-A OS=Danio rerio OX=7955 GN=setd1ba PE=1 SV=2
Q9UPS6Histone-lysine N-methyltransferase SETD1B OS=Homo sapiens OX=9606 GN=SETD1B PE=1 SV=3
Q8CFT2Histone-lysine N-methyltransferase SETD1B OS=Mus musculus OX=10090 GN=Setd1b PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004285 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00856
all species →		SETSET domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR046341
all species →		Homologous_superfamilySET domain superfamilyInterproscan
IPR003616
all species →		DomainPost-SET domainInterproscan
IPR001214
all species →		DomainSET domainInterproscan
IPR044570
all species →		FamilyHistone-lysine N-methyltransferase Set1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45814
all species →		HISTONE-LYSINE N-METHYLTRANSFERASE SETD1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0042800
all species →		Molecular Functionhistone H3K4 methyltransferase activityInterproscan
GO:0048188
all species →		Cellular ComponentSet1C/COMPASS complexInterproscan
GO:0051568
all species →		Biological Processobsolete histone H3-K4 methylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s2980.g1.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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