Detailed information of amic_s3014.g1.t1 in Acropora microphthalma

Genomic Location: sc0003014_pilon:1...2255
NR annotation: XP_015755943.1, PREDICTED: valine--tRNA ligase-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q04462Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars1 PE=2 SV=2
Q9Z1Q9Valine--tRNA ligase OS=Mus musculus OX=10090 GN=Vars1 PE=1 SV=1
P49696Valine--tRNA ligase OS=Takifugu rubripes OX=31033 GN=vars1 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002985 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08264
all species →		Anticodon_1Anticodon-binding domain of tRNA ligaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002303
all species →		FamilyValine-tRNA ligaseInterproscan
IPR037118
all species →		Homologous_superfamilyValyl-tRNA synthetase, tRNA-binding arm superfamilyInterproscan
IPR013155
all species →		DomainMethionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-bindingInterproscan
IPR009080
all species →		Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11946
all species →		VALYL-TRNA SYNTHETASESInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0004832
all species →		Molecular Functionvaline-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006438
all species →		Biological Processvalyl-tRNA aminoacylationInterproscan
GO:0004812
all species →		Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418
all species →		Biological ProcesstRNA aminoacylation for protein translationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s3014.g1.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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