Detailed information of amic_s3047.g1.t1 in Acropora microphthalma

Genomic Location: sc0003047_pilon:1...2662
NR annotation: XP_044166824.1, LOW QUALITY PROTEIN: hemicentin-1-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8BQC3Immunoglobulin superfamily DCC subclass member 3 OS=Mus musculus OX=10090 GN=Igdcc3 PE=2 SV=1
Q8IVU1Immunoglobulin superfamily DCC subclass member 3 OS=Homo sapiens OX=9606 GN=IGDCC3 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000013 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07679
all species →
I-setImmunoglobulin I-set domainDomainInterproscan
PF01391
all species →
CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013098
all species →
DomainImmunoglobulin I-setInterproscan
IPR036179
all species →
Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR008160
all species →
RepeatCollagen triple helix repeatInterproscan
IPR007110
all species →
DomainImmunoglobulin-like domainInterproscan
IPR013783
all species →
Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR050938
all species →
FamilyCollagen and Collagen-like Structural ProteinsInterproscan
IPR003599
all species →
DomainImmunoglobulin subtypeInterproscan
IPR003598
all species →
DomainImmunoglobulin subtype 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37456
all species →
SI:CH211-266K2.1Interproscan

 Gene Ontology
No Gene Ontology signature was detected for amic_s3047.g1.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s3047.g1.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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