Detailed information of amic_s3136.g1.t1 in Acropora microphthalma

Genomic Location: sc0003136_pilon:1...2563
NR annotation: XP_029193454.2, vacuolar protein sorting-associated protein 45-like isoform X2 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P97390Vacuolar protein sorting-associated protein 45 OS=Mus musculus OX=10090 GN=Vps45 PE=1 SV=1
O08700Vacuolar protein sorting-associated protein 45 OS=Rattus norvegicus OX=10116 GN=Vps45 PE=1 SV=1
Q9NRW7Vacuolar protein sorting-associated protein 45 OS=Homo sapiens OX=9606 GN=VPS45 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005486 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00995
all species →		Sec1Sec1 familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036045
all species →		Homologous_superfamilySec1-like superfamilyInterproscan
IPR001619
all species →		FamilySec1-like proteinInterproscan
IPR043154
all species →		Homologous_superfamilySec1-like, domain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11679
all species →		VESICLE PROTEIN SORTING-ASSOCIATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000139
all species →		Cellular ComponentGolgi membraneInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s3136.g1.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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