Detailed information of amic_s3375.g1.t1 in Acropora microphthalma

Genomic Location: sc0003375_pilon:1...683
NR annotation: XP_044171919.1, protein strawberry notch homolog 1-like isoform X1 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5F371Protein strawberry notch homolog 1 OS=Gallus gallus OX=9031 GN=SBNO1 PE=2 SV=1
A8JUV0Protein strawberry notch OS=Drosophila melanogaster OX=7227 GN=sno PE=1 SV=2
A0JND4Protein strawberry notch homolog 2 OS=Bos taurus OX=9913 GN=SBNO2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000611 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13872
all species →		AAA_34P-loop containing NTP hydrolase pore-1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026741
all species →		FamilyProtein strawberry notchInterproscan
IPR039187
all species →		DomainStrawberry notch, AAA domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12706
all species →		STRAWBERRY NOTCH-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0031490
all species →		Molecular Functionchromatin DNA bindingInterproscan
GO:0042393
all species →		Molecular Functionhistone bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s3375.g1.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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