Detailed information of amic_s3428.g1.t1 in Acropora microphthalma

Genomic Location: sc0003428_pilon:1...2334
NR annotation: XP_015777163.1, PREDICTED: rho GTPase-activating protein 10-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6ZM89Rho GTPase-activating protein 42 OS=Danio rerio OX=7955 GN=arhgap42a PE=2 SV=3
A6NI28Rho GTPase-activating protein 42 OS=Homo sapiens OX=9606 GN=ARHGAP42 PE=1 SV=3
Q6Y5D8Rho GTPase-activating protein 10 OS=Mus musculus OX=10090 GN=Arhgap10 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002545 (this species only)

 Pfam domain
No Pfam domain signature was detected for amic_s3428.g1.t1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR000198
all species →		DomainRho GTPase-activating protein domainInterproscan
IPR008936
all species →		Homologous_superfamilyRho GTPase activation proteinInterproscan
IPR047234
all species →		FamilyGRAF familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12552
all species →		OLIGOPHRENIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007165
all species →		Biological Processsignal transductionInterproscan
GO:0005096
all species →		Molecular FunctionGTPase activator activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s3428.g1.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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