Detailed information of amic_s3569.g1.t1 in Acropora microphthalma

Genomic Location: sc0003569_pilon:8...2243
NR annotation: XP_015773600.1, PREDICTED: cryptochrome-1-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P97784Cryptochrome-1 OS=Mus musculus OX=10090 GN=Cry1 PE=1 SV=1
Q70AD6Cryptochrome-1 OS=Spalax judaei OX=134510 GN=CRY1 PE=2 SV=1
Q32Q86Cryptochrome-1 OS=Rattus norvegicus OX=10116 GN=Cry1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001198 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00875
all species →		DNA_photolyaseDNA photolyaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036155
all species →		Homologous_superfamilyCryptochrome/photolyase, N-terminal domain superfamilyInterproscan
IPR014729
all species →		Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR006050
all species →		DomainDNA photolyase, N-terminalInterproscan
IPR002081
all species →		FamilyCryptochrome/DNA photolyase class 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11455
all species →		CRYPTOCHROMEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0032922
all species →		Biological Processcircadian regulation of gene expressionInterproscan
GO:0043153
all species →		Biological Processentrainment of circadian clock by photoperiodInterproscan
GO:0045892
all species →		Biological Processnegative regulation of DNA-templated transcriptionInterproscan
GO:0071949
all species →		Molecular FunctionFAD bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s3569.g1.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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