Detailed information of amic_s3587.g1.t1 in Acropora microphthalma

Genomic Location: sc0003587_pilon:1...1725
NR annotation: XP_029189224.2, lys-63-specific deubiquitinase BRCC36-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A8M3B525Lys-63-specific deubiquitinase OS=Danio rerio OX=7955 GN=brcc3 PE=1 SV=1
B5X8M4Lys-63-specific deubiquitinase BRCC36 OS=Salmo salar OX=8030 GN=brcc3 PE=2 SV=1
Q4VA72Lys-63-specific deubiquitinase BRCC36 OS=Xenopus tropicalis OX=8364 GN=brcc3 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005172 (this species only)
Ubiquitin familyUBD|Other|Jab_MPN · all ubiquitin genes in this species
Ubiquitin familyDUB|JAMM|JAMM · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01398
all species →		JABJAB1/Mov34/MPN/PAD-1 ubiquitin proteaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000555
all species →		DomainJAB1/MPN/MOV34 metalloenzyme domainInterproscan
IPR050242
all species →		FamilyJAMM/MPN+ metalloenzymes, peptidase M67AInterproscan
IPR037518
all species →		DomainMPN domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10410
all species →		EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0008233
all species →		Molecular Functionpeptidase activityInterproscan
GO:0008237
all species →		Molecular Functionmetallopeptidase activityInterproscan
GO:0006302
all species →		Biological Processdouble-strand break repairInterproscan
GO:0031593
all species →		Molecular Functionpolyubiquitin modification-dependent protein bindingInterproscan
GO:0070531
all species →		Cellular ComponentBRCA1-A complexInterproscan
GO:0070552
all species →		Cellular ComponentBRISC complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s3587.g1.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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