Detailed information of amic_s3986.g1.t1 in Acropora microphthalma

Genomic Location: sc0003986_pilon:1...2127
NR annotation: XP_015755811.1, PREDICTED: nucleoprotein TPR-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
F1MA98Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1
P12270Nucleoprotein TPR OS=Homo sapiens OX=9606 GN=TPR PE=1 SV=3
F6ZDS4Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002126 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07926
all species →		TPR_MLP1_2TPR/MLP1/MLP2-like proteinCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012929
all species →		DomainNucleoprotein TPR/MLP1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18898
all species →		NUCLEOPROTEIN TPR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006606
all species →		Biological Processprotein import into nucleusInterproscan
GO:0005643
all species →		Cellular Componentnuclear poreInterproscan
GO:0006406
all species →		Biological ProcessmRNA export from nucleusInterproscan
GO:0017056
all species →		Molecular Functionstructural constituent of nuclear poreInterproscan
GO:1901673
all species →		Biological Processregulation of mitotic spindle assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s3986.g1.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP