Detailed information of amic_s4410.g2.t1 in Acropora microphthalma

Genomic Location: sc0004410_pilon:826...2049
NR annotation: XP_015766453.1, PREDICTED: trafficking protein particle complex subunit 4-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9ES56Trafficking protein particle complex subunit 4 OS=Mus musculus OX=10090 GN=Trappc4 PE=1 SV=1
Q9Y296Trafficking protein particle complex subunit 4 OS=Homo sapiens OX=9606 GN=TRAPPC4 PE=1 SV=1
Q5R9J9Trafficking protein particle complex subunit 4 OS=Pongo abelii OX=9601 GN=TRAPPC4 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008307 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04099
all species →		SybindinSybindin-like family FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007233
all species →		FamilyTrafficking protein particle complex subunitInterproscan

 PANTHER
No PANTHER signature was detected for amic_s4410.g2.t1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan
GO:0030008
all species →		Cellular ComponentTRAPP complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s4410.g2.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP