Genomic Location: sc0000001_pilon:2908238...2922345
NR annotation: XP_015756609.1, PREDICTED: uncharacterized protein LOC107336061 [Acropora digitifera]
| CDS |
| amur_s0001.g239.t2 |
| Transcript |
| amur_s0001.g239.t2 |
| Protein |
| amur_s0001.g239.t2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| PF00229 | TNF | TNF(Tumour Necrosis Factor) family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR050149 | Family | Collagen superfamily | Interproscan |
| IPR008983 | Homologous_superfamily | Tumour necrosis factor-like domain superfamily | Interproscan |
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| IPR006052 | Domain | Tumour necrosis factor domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24023 | COLLAGEN ALPHA | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005615 | Cellular Component | extracellular space | Interproscan |
| GO:0031012 | Cellular Component | extracellular matrix | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005164 | Molecular Function | tumor necrosis factor receptor binding | Interproscan |
| GO:0006955 | Biological Process | immune response | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K24213 | C1QTNF9; complement C1q and tumor necrosis factor-related protein 9 | - | Domain-containing proteins not elsewhere classified | ko04990 | deepkoala |
