Gene detail

Detailed information of amur_s0023.g75.t1 in Acropora muricata

Genomic Location: sc0000023_pilon:1059847...1069649
NR annotation: XP_044184808.1, uncharacterized protein LOC122964953 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

amur_s0023.g75.t1

ATGAGTGGAGCAGCCAAAGTGAAAGTTGGTGCCCTTAGATCTTTTGATGAAGATGGAATTAGATGGTTGGATGAAGAGCTGGAAAAAGCATTAGACCATGACTATCCAGACTGGAAAAACCCATCTAAAACATATATGGTGCCATGCACCTTTGAAATGAAAGGAAATAGAGATGAAAAGGGGCAACTTGCTGAGAAGAAAGTTTTTGATCTTCTCCACGATTTTGGAAACGATAACAAGGAACCAATGTTCGTGGTGCATTCCTACGATTTTCAAGAGATAACTAACAATTGGAAGAACCAAACACAGTATCAAGAGAAATATCAAAGAGGAGAGCATGATTTTTTGCTTCTCCACCGGAATTATGGAATGATATTCCTTCAAGTTAAGGAAGCCACACCATCCACCAAAAGGAACCAAATAGCTTCAGCTAGGACACAATTGGAAAAAGACAAGGACTCACTAATGTATTTTGCAGGAAACAAGTTGAGGGGTCGTCTCAAAAAAAAAATGGGATGTGAAAGGTCACATATATACACGTATTTTGTGATGCCAAGCTGCCGACGAGGTAAATCATGTCATAATTCAGGTGGAATATTCAAGGAGGATTGTGAAAATGTAGAGGCGTTTTCAAAGTGGTGGAAGAAGAACATTGTACCAAGGACACCTCCAGATCAGGAAGTATATAACTGCCTGGTGATGCGCTTTGTTGGGCTGAGTCATGATGTCCCATACCCACTGAGTTTCGCCATTGAGGACAGTCACAAAGAACTGATGCGCCATACAAGTGAACAGGCGAAGATTTTCCGGAACTCAACAGCAGAGCAATGGATCACAGGACCAGCAGGAAGTGGCAAGTCCTGGCTTCTTATAGAGAAGGTGAAACAACTTAGCGCAAGTCAGAGTGGAGAAAAAATCCTTGTGGTATGTGTCAGCCCAGGATTTTCTAAGAGTCTGGAGAAAGAATTCAAAGATTGCAGTCGTGTGGTAGTTAAAAGGTTCGAAGAACTCTTACTTGAAATTACTGAGACAGAAAGGCCTTTTGACAGAGCATCGCAGCACGACCTCATCAGGCTCACTTTAGAGAAATTGGAGCAGAACACTCCTCAACCTGAATATGATCACATATTCGTTGACGAGTGCGAGGATTTGATCGGTGGAGAGTGGCCAGTCCTTTTCCAAAAAATATGGAAAGGCAATGAAGATGATTGTGGCAGCACAGAAGTCCCGGGATGCAAGTATAAATGGTACTTCTATGACACCTACCAGTGTGGCCAATACTCAGATAAGCACAAACTCAGGAAGGCCCTTGCAACAAGTTCTAAGCTGACTCGTGTGCTTAGAAACACTGGCAACATCTTTGACCAGTATAAAAAGTATTCTCAAGAACTTGACGGTACTGAAGGAATCACACTGGGACACAGGAAGTGGGGCTTGAACATTGATTGGCAAGCCTCCTTGCCTTCAGAAATGGTCACTGAGAAAGAAGGAGCCCACTTGGTAGCCAAGTGCATCGAGAAGCTGCGAAACGAGAACGTTTCAGAGGCAGATGTATGTGTCTTGGTGCAAAACGAAGATATAAGAGACCAGCTCAGCTCTGAGCTCAAAGTGCTAGATGTGGACAACCACAATGCAGAGGATCAGTTTGAAGTTAACCACAAGAGCAAGGTCGTGGTTGACAGTATATGGCGATTCAAAGGGTTAGAGTCTAAAGTTGTGATTCTCTATAACCCTGTATTTGCCATGACAGAGAACATACCTGTCATCAAGCTCTTGTACATAGCATTGTCAAGATGTAACTGTCACTTAGTGGTTATCACCACCAAGAGAGGTGTAGCTGCATTAAAATCAAAGTATGGTTTTGATATAGATCATCGGATGACTCCAGAGATGCTTAAGAATGTAGAGTTGAAAGGACCTATAGGCCACACAATTCGTTGGTTGGCCTCATTCTATGAGTTAGTATGTTTCAGAAAGCCCTCGCGCACAATTCCAACGTTGGTACGTCTTGAGATGCTTTACAACGTTTCAGAGGACCGCTGGTTGTCGTCGCAACTGGAACTCAGTGATGTAGAAAGATCTAATTTATTTAGTTCTCTAGAGGATATATGTTCAACATATGAACTCAACTATTGCGGAGTTTCTGCAGCTGAATCCGCGGAGCGAGGGCAGCATTTTCGaatctgttatgaataa

Transcript

amur_s0023.g75.t1

GAATCTCGCATGACTTTTCATAATTCTTGAGAGAGACGGCAGAAGCAATGAGTGGAGCAGCCAAAGTGAAAGTTGGTGCCCTTAGATCTTTTGATGAAGATGGAATTAGATGGTTGGATGAAGAGCTGGAAAAAGCATTAGACCATGACTATCCAGACTGGAAAAACCCATCTAAAACATATATGGTGCCATGCACCTTTGAAATGAAAGGAAATAGAGATGAAAAGGGGCAACTTGCTGAGAAGAAAGTTTTTGATCTTCTCCACGATTTTGGAAACGATAACAAGGAACCAATGTTCGTGGTGCATTCCTACGATTTTCAAGAGATAACTAACAATTGGAAGAACCAAACACAGTATCAAGAGAAATATCAAAGAGGAGAGCATGATTTTTTGCTTCTCCACCGGAATTATGGAATGATATTCCTTCAAGTTAAGGAAGCCACACCATCCACCAAAAGGAACCAAATAGCTTCAGCTAGGACACAATTGGAAAAAGACAAGGACTCACTAATGTATTTTGCAGGAAACAAGTTGAGGGGTCGTCTCAAAAAAAAAATGGGATGTGAAAGGTCACATATATACACGTATTTTGTGATGCCAAGCTGCCGACGAGGTAAATCATGTCATAATTCAGGTGGAATATTCAAGGAGGATTGTGAAAATGTAGAGGCGTTTTCAAAGTGGTGGAAGAAGAACATTGTACCAAGGACACCTCCAGATCAGGAAGTATATAACTGCCTGGTGATGCGCTTTGTTGGGCTGAGTCATGATGTCCCATACCCACTGAGTTTCGCCATTGAGGACAGTCACAAAGAACTGATGCGCCATACAAGTGAACAGGCGAAGATTTTCCGGAACTCAACAGCAGAGCAATGGATCACAGGACCAGCAGGAAGTGGCAAGTCCTGGCTTCTTATAGAGAAGGTGAAACAACTTAGCGCAAGTCAGAGTGGAGAAAAAATCCTTGTGGTATGTGTCAGCCCAGGATTTTCTAAGAGTCTGGAGAAAGAATTCAAAGATTGCAGTCGTGTGGTAGTTAAAAGGTTCGAAGAACTCTTACTTGAAATTACTGAGACAGAAAGGCCTTTTGACAGAGCATCGCAGCACGACCTCATCAGGCTCACTTTAGAGAAATTGGAGCAGAACACTCCTCAACCTGAATATGATCACATATTCGTTGACGAGTGCGAGGATTTGATCGGTGGAGAGTGGCCAGTCCTTTTCCAAAAAATATGGAAAGGCAATGAAGATGATTGTGGCAGCACAGAAGTCCCGGGATGCAAGTATAAATGGTACTTCTATGACACCTACCAGTGTGGCCAATACTCAGATAAGCACAAACTCAGGAAGGCCCTTGCAACAAGTTCTAAGCTGACTCGTGTGCTTAGAAACACTGGCAACATCTTTGACCAGTATAAAAAGTATTCTCAAGAACTTGACGGTACTGAAGGAATCACACTGGGACACAGGAAGTGGGGCTTGAACATTGATTGGCAAGCCTCCTTGCCTTCAGAAATGGTCACTGAGAAAGAAGGAGCCCACTTGGTAGCCAAGTGCATCGAGAAGCTGCGAAACGAGAACGTTTCAGAGGCAGATGTATGTGTCTTGGTGCAAAACGAAGATATAAGAGACCAGCTCAGCTCTGAGCTCAAAGTGCTAGATGTGGACAACCACAATGCAGAGGATCAGTTTGAAGTTAACCACAAGAGCAAGGTCGTGGTTGACAGTATATGGCGATTCAAAGGGTTAGAGTCTAAAGTTGTGATTCTCTATAACCCTGTATTTGCCATGACAGAGAACATACCTGTCATCAAGCTCTTGTACATAGCATTGTCAAGATGTAACTGTCACTTAGTGGTTATCACCACCAAGAGAGGTGTAGCTGCATTAAAATCAAAGTATGGTTTTGATATAGATCATCGGATGACTCCAGAGATGCTTAAGAATGTAGAGTTGAAAGGACCTATAGGCCACACAATTCGTTGGTTGGCCTCATTCTATGAGTTAGTATGTTTCAGAAAGCCCTCGCGCACAATTCCAACGTTGGTACGTCTTGAGATGCTTTACAACGTTTCAGAGGACCGCTGGTTGTCGTCGCAACTGGAACTCAGTGATGTAGAAAGATCTAATTTATTTAGTTCTCTAGAGGATATATGTTCAACATATGAACTCAACTATTGCGGAGTTTCTGCAGCTGAATCCGCGGAGCGAGGGCAGCATTTTCGaatctgttatgaataaaaagcttttgtttttcaactttcttttctaataaaaaaaccttttcaacttaaatggatttctaaataaaaggagaaaaactcgcgcctgcgtcaccgtgcacgtgggcagagatgggaaatccggatcaaatttctgaattcgtaacggtgccctcttgaaacaaaCACAAAAAGTTTTATTGCGGCTTTTAAAGCTCACTGGTGTTAGCTTAAAAAGCATAATGTGCTTAGCCGTGGTTGGTTTTGGATATATTAACGTAAGTGCGTTTTTGTCAATATATTTTACAAAGAACAGTGACAATGTTTTATTTAAAAGGTTAGCTTAGAGTATTATTGTTAGATTTCAGCATTTTTCATTTAGTTCTATAATTACAGCACGTTAATCCATAGATTGAGAGAGGTATCTGTTCATTTCATAGATTATTTTGAAGTTACAAGAAATTGTTCATGTGTTGCTTGTGTTTCAATTTTGAACCATCAGATTGCTTACATATTTCAGAGAAAAGCTTGTTATGGACGCATTTTGTTGAAGTTCGCTTTGAAAAAAAATTGAGAATTGCA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04851	ResIII	Type III restriction enzyme, res subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR006935	Domain	Helicase/UvrB, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016787	Molecular Function	hydrolase activity	Interproscan