Detailed information of amur_s0079.g36.t1 in Acropora muricata

Genomic Location: sc0000079_pilon:527057...531152
NR annotation: XP_015748765.1, PREDICTED: hemicentin-2-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7ZW34Contactin-5 OS=Danio rerio OX=7955 GN=cntn5 PE=2 SV=1
Q0V8T4Contactin-associated protein like 5-3 OS=Rattus norvegicus OX=10116 GN=Cntnap5c PE=2 SV=1
Q3UH53Protein sidekick-1 OS=Mus musculus OX=10090 GN=Sdk1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR051170FamilyNeural and epithelial cell adhesion domain-containing proteinInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12231CTX-RELATED TYPE I TRANSMEMBRANE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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