Gene detail

Detailed information of amur_s0079.g43.t1 in Acropora muricata

Genomic Location: sc0000079_pilon:631357...644923
NR annotation: XP_029207960.2, LOW QUALITY PROTEIN: protein SDA1 homolog [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A7S6A5	Protein SDA1 homolog OS=Nematostella vectensis OX=45351 GN=sdad1 PE=3 SV=1
Q9NVU7	Protein SDA1 homolog OS=Homo sapiens OX=9606 GN=SDAD1 PE=1 SV=3
Q2VPG3	Protein SDA1 homolog OS=Xenopus laevis OX=8355 GN=sdad1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08158	SDA1_HEAT	SDA1, HEAT repeat	Repeat	Interproscan
PF05285	SDA1_dom	SDA1, conserved domain	Domain	Interproscan
PF21638	SDA1_C	SDA1, C-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012977	Domain	SDA1, N-terminal	Interproscan
IPR007949	Domain	SDA1, middle domain	Interproscan
IPR048292	Domain	SDA1, C-terminal domain	Interproscan
IPR027312	Family	Sda1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12730	HSDA/SDA1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000055	Biological Process	ribosomal large subunit export from nucleus	Interproscan
GO:0005730	Cellular Component	nucleolus	Interproscan
GO:0042273	Biological Process	ribosomal large subunit biogenesis	Interproscan