Genomic Location: sc0000092_pilon:352137...369365
NR annotation: XP_029193630.2, putative RNA-binding protein EEED8.10 isoform X4 [Acropora millepora]
| CDS |
| amur_s0092.g27.t1 |
| Transcript |
| amur_s0092.g27.t1 |
| Protein |
| amur_s0092.g27.t1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13516 | LRR_6 | Leucine Rich repeat | Repeat | Interproscan |
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| PF12937 | F-box-like | F-box-like | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR006553 | Repeat | Leucine-rich repeat, cysteine-containing subtype | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR001611 | Repeat | Leucine-rich repeat | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR032675 | Homologous_superfamily | Leucine-rich repeat domain superfamily | Interproscan |
| IPR001810 | Domain | F-box domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13318 | UNCHARACTERIZED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0019005 | Cellular Component | SCF ubiquitin ligase complex | Interproscan |
| GO:0031146 | Biological Process | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10268 | FBXL2_20; F-box and leucine-rich repeat protein 2/20 | - | Ubiquitin system | ko04121 | deepkoala |
